Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913528.1_cds_XP_016463572.1_56682
CDS Infomation

[gene=LOC107786581] [db_xref=GeneID:107786581] [protein=uncharacterized protein LOC107786581 isoform X3] [protein_id=XP_016463572.1] [location=complement(join(46214..46317,46411..46501,46582..46692,46873..46920,47001..47099,47301..47413,47593..47848,47947..48036,48164..48377,49806..50154,50269..50380,50472..50684))] [gbkey=CDS]
Sequence

ATGAGGAAACTTCAAGCAGTCATCCACTTATATTCTTACATTCATCACCGAGGATTGGAA
CAGGTCAAGGCTACCAACATATTTACAGAGGAGGAGGTAGAGTTTGACTTATGGAAAATG
GTAGAAGGTGTAAAAGAGACCTTGGATACAATATCTTTTGCTGAGGGGACTCCCAAACTT
GCAATATGGAACAGTCCATTTTATGATATGAAGAGCTTGAAGGAATTGCCCAGATCATAC
GATGAATTCAAGAGGATGAAATTGCCCACTATGTCACCTCTTTCTCCCCAAGTGTTACCA
AAAGGAGATATGAGCTTGTCTTGGGGTACTTTGCCCACATTAGAAGATTTGAAGAAATTT
ATGGATGACAATGCTGGCACGTTAGGAAACAGATGGGCTTCGATTGAGAAGGATTCAGCT
ACAAGTGAATTGCGAAAAGACCAGGCAGCAACTCTGAGTACTGTGGTTCAAGGTTTGAGA
GAGGAAAAGTTTAAGGGGATTGGGAACAGTCAAAGTGATTCAAGTCTCAAGAAAATTCAG
AGGAAGAGACCCGTAAAATCTGCTTTTGTCACACAATGCGGAAATATAGTGGGAGGTGGT
ACAAGTCTAGTGTTGAATGCTTTGGCTGCATATTTGAGATATCTGGAGGGTACTTCTCGA
GATGAATGGCAGGAGGTACATGAAAAACTGCGTGCAGCTGAAACTCGGGAAGGAGCCTCA
TTTGGTGCTCTTTTTGGGTCTGCTCTTCTTCTTGGAATAATTTCCAGAAGAAGAGTGTAT
TATGAAGCGATTGAGTACGATAAAGAGCGAAATGCTGGAATTATATCGCATTTTGGATGC
TCGGCAAAAATGGTTGCTGCAGCAGCGGATACTGTGTGTTCAATGGAGTGGTATACGCTG
TTGGCTTTGAAAAGTAAGGCAGCTAGTTTGGGAGGTTCCTCTGTTAGGATATGGAGATGG
AATGGCTATCTGATCCATTATACACAGAGTGGTGATGAAGGTCCTGCTCTTCTGCTCGTG
CATGGTTTTGGTGCTTTTTGGAGCCATTATCGTGACAATATACATAACATTGCGGAAGGT
GGAAGTCGAGTCTGGGCATTGACACTCCTGGGGTTTGGTGAATCAGAAAAACCAAATATT
GTCTACACTGAAGTTGTATGGGCTAAATTGCTGAGAGATTTCATAATTGAAGTAGTGGGA
GAACCTGTCCATCTTGTTGGCAACTCAATTGGAGGATATCTTGTTGCCATTGTTGCTCGT
CTTTGGCCTGCTTTGGCCAAGTCTGTGATCCTTTTGAACAGTGCTGGCAATGTTATTCCT
GGCTATTCTGGTGCACGCCATTCTGATGTTAGGCAAACTTCAGGAGCAGCATGGTTAGCT
GCCCGGTTCCTTTCACTGTTCTTGCGTTTGAATCTGAGGAAAATAGTGAGAAGTTGCTAT
CCAATTAGAAGTGATCGTGCAGATGAGTGGCTTATCCAGGAGATGTTGCGAGCATCTTAT
GACCCTGGTGTAGTGGTGGTCTTAGAAAGCATTTTCAGCTTTGATCTTTCTGTCCCTCTT
AATTATCTTTTGCAAGGATTTGAGAAGAGAGTTCTTGTATTACAGGGAATGAAAGATCCA
ATTTCTGATTCAAAATCAAGGTTAGATATGCTGAGAGAACACTGTGAAGGAATCATAATC
AGAGAGTTAGATGCTGGCCATTGCCCACATGATGAGAAACCAGAGGAAGTCAACTCTATC
ATTCAAGAATGGGTAAATACACTTGAGAGTGAAGTACTTACAACTAGCTCAAGAAGGTAG

Peptide Sequence

PEP ID

XP_016463572.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107786581 isoform X3 [Nicotiana tabacum]
Sequence

MRKLQAVIHLYSYIHHRGLEQVKATNIFTEEEVEFDLWKMVEGVKETLDTISFAEGTPKL
AIWNSPFYDMKSLKELPRSYDEFKRMKLPTMSPLSPQVLPKGDMSLSWGTLPTLEDLKKF
MDDNAGTLGNRWASIEKDSATSELRKDQAATLSTVVQGLREEKFKGIGNSQSDSSLKKIQ
RKRPVKSAFVTQCGNIVGGGTSLVLNALAAYLRYLEGTSRDEWQEVHEKLRAAETREGAS
FGALFGSALLLGIISRRRVYYEAIEYDKERNAGIISHFGCSAKMVAAAADTVCSMEWYTL
LALKSKAASLGGSSVRIWRWNGYLIHYTQSGDEGPALLLVHGFGAFWSHYRDNIHNIAEG
GSRVWALTLLGFGESEKPNIVYTEVVWAKLLRDFIIEVVGEPVHLVGNSIGGYLVAIVAR
LWPALAKSVILLNSAGNVIPGYSGARHSDVRQTSGAAWLAARFLSLFLRLNLRKIVRSCY
PIRSDRADEWLIQEMLRASYDPGVVVVLESIFSFDLSVPLNYLLQGFEKRVLVLQGMKDP
ISDSKSRLDMLREHCEGIIIRELDAGHCPHDEKPEEVNSIIQEWVNTLESEVLTTSSRR

Transcript Sequence

Gene sequence data has not been registered.